Temporal Graph-Convolutional Layers
Convolutions for time-varying graphs (temporal graphs) such as the TemporalSnapshotsGNNGraph.
GNNLux.A3TGCN — TypeA3TGCN(in => out; use_bias = true, init_weight = glorot_uniform, init_state = zeros32, init_bias = zeros32, add_self_loops = false, use_edge_weight = true)Attention Temporal Graph Convolutional Network (A3T-GCN) model from the paper A3T-GCN: Attention Temporal Graph Convolutional Network for Traffic Forecasting.
Performs a TGCN layer, followed by a soft attention layer.
Arguments
in: Number of input features.out: Number of output features.use_bias: Add learnable bias. Defaulttrue.init_weight: Weights' initializer. Defaultglorot_uniform.init_state: Initial state of the hidden stat of the GRU layer. Defaultzeros32.init_bias: Bias initializer. Defaultzeros32.add_self_loops: Add self loops to the graph before performing the convolution. Defaultfalse.use_edge_weight: Iftrue, consider the edge weights in the input graph (if available). Ifadd_self_loops=truethe new weights will be set to 1. This option is ignored if theedge_weightis explicitly provided in the forward pass. Defaultfalse.
Examples
using GNNLux, Lux, Random
# initialize random number generator
rng = Random.default_rng()
# create data
g = rand_graph(rng, 5, 10)
x = rand(rng, Float32, 2, 5)
# create A3TGCN layer
l = A3TGCN(2 => 6)
# setup layer
ps, st = LuxCore.setup(rng, l)
# forward pass
y, st = l(g, x, ps, st) # result size (6, 5)GNNLux.EvolveGCNO — TypeEvolveGCNO(ch; use_bias = true, init_weight = glorot_uniform, init_state = zeros32, init_bias = zeros32)Evolving Graph Convolutional Network (EvolveGCNO) layer from the paper EvolveGCN: Evolving Graph Convolutional Networks for Dynamic Graphs.
Perfoms a Graph Convolutional layer with parameters derived from a Long Short-Term Memory (LSTM) layer across the snapshots of the temporal graph.
Arguments
in: Number of input features.out: Number of output features.use_bias: Add learnable bias. Defaulttrue.init_weight: Weights' initializer. Defaultglorot_uniform.init_state: Initial state of the hidden stat of the GRU layer. Defaultzeros32.init_bias: Bias initializer. Defaultzeros32.
Examples
using GNNLux, Lux, Random
# initialize random number generator
rng = Random.default_rng()
# create data
tg = TemporalSnapshotsGNNGraph([rand_graph(rng, 10, 20; ndata = rand(rng, 4, 10)), rand_graph(rng, 10, 14; ndata = rand(rng, 4, 10)), rand_graph(rng, 10, 22; ndata = rand(rng, 4, 10))])
# create layer
l = EvolveGCNO(4 => 5)
# setup layer
ps, st = LuxCore.setup(rng, l)
# forward pass
y, st = l(tg, tg.ndata.x , ps, st) # result size 3, size y[1] (5, 10)GNNLux.DCGRU — MethodDCGRU(in => out, k; use_bias = true, init_weight = glorot_uniform, init_state = zeros32, init_bias = zeros32)Diffusion Convolutional Recurrent Neural Network (DCGRU) layer from the paper Diffusion Convolutional Recurrent Neural Network: Data-driven Traffic Forecasting.
Performs a Diffusion Convolutional layer to model spatial dependencies, followed by a Gated Recurrent Unit (GRU) cell to model temporal dependencies.
Arguments
in: Number of input features.out: Number of output features.k: Diffusion step.use_bias: Add learnable bias. Defaulttrue.init_weight: Weights' initializer. Defaultglorot_uniform.init_state: Initial state of the hidden stat of the GRU layer. Defaultzeros32.init_bias: Bias initializer. Defaultzeros32.
Examples
using GNNLux, Lux, Random
# initialize random number generator
rng = Random.default_rng()
# create data
g = rand_graph(rng, 5, 10)
x = rand(rng, Float32, 2, 5)
# create layer
l = DCGRU(2 => 5, 2)
# setup layer
ps, st = LuxCore.setup(rng, l)
# forward pass
y, st = l(g, x, ps, st) # result size (5, 5)GNNLux.GConvGRU — MethodGConvGRU(in => out, k; use_bias = true, init_weight = glorot_uniform, init_state = zeros32, init_bias = zeros32)Graph Convolutional Gated Recurrent Unit (GConvGRU) recurrent layer from the paper Structured Sequence Modeling with Graph Convolutional Recurrent Networks.
Performs a layer of ChebConv to model spatial dependencies, followed by a Gated Recurrent Unit (GRU) cell to model temporal dependencies.
Arguments
in: Number of input features.out: Number of output features.k: Chebyshev polynomial order.use_bias: Add learnable bias. Defaulttrue.init_weight: Weights' initializer. Defaultglorot_uniform.init_state: Initial state of the hidden stat of the GRU layer. Defaultzeros32.init_bias: Bias initializer. Defaultzeros32.
Examples
using GNNLux, Lux, Random
# initialize random number generator
rng = Random.default_rng()
# create data
g = rand_graph(rng, 5, 10)
x = rand(rng, Float32, 2, 5)
# create layer
l = GConvGRU(2 => 5, 2)
# setup layer
ps, st = LuxCore.setup(rng, l)
# forward pass
y, st = l(g, x, ps, st) # result size (5, 5)GNNLux.GConvLSTM — MethodGConvLSTM(in => out, k; use_bias = true, init_weight = glorot_uniform, init_state = zeros32, init_bias = zeros32)Graph Convolutional Long Short-Term Memory (GConvLSTM) recurrent layer from the paper Structured Sequence Modeling with Graph Convolutional Recurrent Networks.
Performs a layer of ChebConv to model spatial dependencies, followed by a Long Short-Term Memory (LSTM) cell to model temporal dependencies.
Arguments
in: Number of input features.out: Number of output features.k: Chebyshev polynomial order.use_bias: Add learnable bias. Defaulttrue.init_weight: Weights' initializer. Defaultglorot_uniform.init_state: Initial state of the hidden stat of the GRU layer. Defaultzeros32.init_bias: Bias initializer. Defaultzeros32.
Examples
using GNNLux, Lux, Random
# initialize random number generator
rng = Random.default_rng()
# create data
g = rand_graph(rng, 5, 10)
x = rand(rng, Float32, 2, 5)
# create GConvLSTM layer
l = GConvLSTM(2 => 5, 2)
# setup layer
ps, st = LuxCore.setup(rng, l)
# forward pass
y, st = l(g, x, ps, st) # result size (5, 5)GNNLux.TGCN — MethodTGCN(in => out; use_bias = true, init_weight = glorot_uniform, init_state = zeros32, init_bias = zeros32, add_self_loops = false, use_edge_weight = true, act = sigmoid)Temporal Graph Convolutional Network (T-GCN) recurrent layer from the paper T-GCN: A Temporal Graph Convolutional Network for Traffic Prediction.
Performs a layer of GCNConv to model spatial dependencies, followed by a Gated Recurrent Unit (GRU) cell to model temporal dependencies.
Arguments
in: Number of input features.out: Number of output features.use_bias: Add learnable bias. Defaulttrue.init_weight: Weights' initializer. Defaultglorot_uniform.init_state: Initial state of the hidden stat of the GRU layer. Defaultzeros32.init_bias: Bias initializer. Defaultzeros32.add_self_loops: Add self loops to the graph before performing the convolution. Defaultfalse.use_edge_weight: Iftrue, consider the edge weights in the input graph (if available). Ifadd_self_loops=truethe new weights will be set to 1. This option is ignored if theedge_weightis explicitly provided in the forward pass. Defaultfalse.act: Activation function used in the GCNConv layer. Defaultsigmoid.
Examples
using GNNLux, Lux, Random
# initialize random number generator
rng = Random.default_rng()
# create data
g = rand_graph(rng, 5, 10)
x = rand(rng, Float32, 2, 5)
# create TGCN layer
tgcn = TGCN(2 => 6)
# create TGCN layer with custom activation
tgcn_relu = TGCN(2 => 6, act = relu)
# setup layer
ps, st = LuxCore.setup(rng, tgcn)
# forward pass
y, st = tgcn(g, x, ps, st) # result size (6, 5)