Experimental algorithms

Graphs.Experimental is a module for graph algorithms that are newer or less stable. We can adopt algorithms before we finalize an interface for using them or if we feel that full support cannot be provided to the current implementation. You can expect new developments to land here before they make it into the main module. This enables the development to keep advancing without being risk-averse because of stability guarantees. You can think of this module as a 0.X semantic version space ; it is a place where you can play around with new algorithms, perspectives, and interfaces without fear of breaking critical code.

A Note To Users

Code in this module is unstable and subject to change. Do not use any code in this module in production environments without understanding the (large) risks involved. However, we welcome bug reports and issues via the normal channels..

Index

Full docs

Graphs.Experimental.all_induced_subgraphisomorphFunction
all_induced_subgraphisomorph(g1, g2, alg::IsomorphismAlgorithm=VF2(); vertex_relation=nothing, edge_relation=nothing)

Return all isomorphism from vertex induced subgraphs of g1 to g2. The isomorphisms are returned as an iterator of vectors of tuples, where the i-th vector is the i-th isomorphism and a tuple (u, v) in this vector means that u ∈ g1 is mapped to v ∈ g2.

Optional Arguments

  • alg: The algorithm that is used to find the induced subgraph isomorphism. Can be only VF2() at the moment.
  • vertex_relation: A binary function that takes a vertex from g1 and one from g2. An isomorphism only exists if this function returns true for all matched vertices.
  • edge_relation: A binary function that takes an edge from g1 and one from g2. An isomorphism only exists if this function returns true for all matched edges.

Examples

julia> all_induced_subgraphisomorph(path_graph(3), SimpleGraph(2)) |> collect
2-element Array{Array{Tuple{Int64,Int64},1},1}:
 [(1, 1), (3, 2)]
 [(3, 1), (1, 2)]

julia> g1 = path_digraph(3); color1 = [1, 1, 2]
julia> g2 = path_digraph(2); color2 = [1, 2]
julia> color_rel(u, v) = (color1[u] == color2[v])
julia> all_induced_subgraphisomorph(g1, g2) |> collect
2-element Array{Array{Tuple{Int64,Int64},1},1}:
 [(1, 1), (2, 2)]
 [(2, 1), (3, 2)]
julia> all_induced_subgraphisomorph(g1, g2, vertex_relation=color_rel) |> collect
1-element Array{Array{Tuple{Int64,Int64},1},1}:
 [(1, 1), (2, 2)]

See also

all_subgraphisomorph, all_isomorph, has_induced_subgraphisomorph, count_induced_subgraphisomorph

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Graphs.Experimental.all_isomorphFunction
all_isomorph(g1, g2, alg::IsomorphismAlgorithm=VF2(); vertex_relation=nothing, edge_relation=nothing)

Return all isomorphism from g1 to g2. The isomorphisms are returned as an iterator of vectors of tuples, where the i-th vector is the i-th isomorphism and a tuple (u, v) in this vector means that u ∈ g1 is mapped to v ∈ g2.

Optional Arguments

  • alg: The algorithm that is used to find the induced subgraph isomorphism. Can be only VF2() at the moment.
  • vertex_relation: A binary function that takes a vertex from g1 and one from g2. An isomorphism only exists if this function returns true for all matched vertices.
  • edge_relation: A binary function that takes an edge from g1 and one from g2. An isomorphism only exists if this function returns true for all matched edges.

Examples

julia> all_isomorph(star_graph(4), star_graph(4)) |> collect
6-element Array{Array{Tuple{Int64,Int64},1},1}:
 [(1, 1), (2, 2), (3, 3), (4, 4)]
 [(1, 1), (2, 2), (4, 3), (3, 4)]
 [(1, 1), (3, 2), (2, 3), (4, 4)]
 [(1, 1), (3, 2), (4, 3), (2, 4)]
 [(1, 1), (4, 2), (2, 3), (3, 4)]
 [(1, 1), (4, 2), (3, 3), (2, 4)]
 
julia> g1 = cycle_digraph(3); color1 = [1, 1, 2]
julia> g2 = cycle_digraph(3); color2 = [2, 1, 1]
julia> color_rel(u, v) = (color1[u] == color2[v])
julia> all_isomorph(g1, g2) |> collect
3-element Array{Array{Tuple{Int64,Int64},1},1}:
 [(1, 1), (2, 2), (3, 3)]
 [(2, 1), (3, 2), (1, 3)]
 [(3, 1), (1, 2), (2, 3)]
julia> all_subgraphisomorph(g1, g2, vertex_relation=color_rel)
1-element Array{Array{Tuple{Int64,Int64},1},1}:
 [(3, 1), (1, 2), (2, 3)]

See also

all_induced_subgraphisomorph, all_subgraphisomorph, has_isomorph, count_isomorph

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Graphs.Experimental.all_subgraphisomorphFunction
all_subgraphisomorph(g1, g2, alg::IsomorphismAlgorithm=VF2(); vertex_relation=nothing, edge_relation=nothing)

Return all isomorphism from subgraphs of g1 to g2. The isomorphisms are returned as an iterator of vectors of tuples, where the i-th vector is the i-th isomorphism and a tuple (u, v) in this vector means that u ∈ g1 is mapped to v ∈ g2.

Optional Arguments

  • alg: The algorithm that is used to find the induced subgraph isomorphism. Can be only VF2() at the moment.
  • vertex_relation: A binary function that takes a vertex from g1 and one from g2. An isomorphism only exists if this function returns true for all matched vertices.
  • edge_relation: A binary function that takes an edge from g1 and one from g2. An isomorphism only exists if this function returns true for all matched edges.

Examples

julia> all_subgraphisomorph(path_graph(3), path_graph(2)) |> collect
4-element Array{Array{Tuple{Int64,Int64},1},1}:
 [(1, 1), (2, 2)]
 [(2, 1), (1, 2)]
 [(2, 1), (3, 2)]
 [(3, 1), (2, 2)]

julia> g1 = path_digraph(3); color1 = [1, 1, 2]
julia> g2 = path_digraph(2); color2 = [1, 2]
julia> color_rel(u, v) = (color1[u] == color2[v])
julia> all_subgraphisomorph(g1, g2) |> collect
2-element Array{Array{Tuple{Int64,Int64},1},1}:
 [(1, 1), (2, 2)]
 [(2, 1), (3, 2)]
julia> all_subgraphisomorph(g1, g2, vertex_relation=color_rel)
1-element Array{Array{Tuple{Int64,Int64},1},1}:
 [(2, 1), (3, 2)]

See also

all_induced_subgraphisomorph, all_isomorph, has_subgraphisomorph, count_subgraphisomorph

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Graphs.Experimental.could_have_isomorphMethod
could_have_isomorph(g1, g2)

Run quick test to check if g1 andg2` could be isomorphic.

If the result is false, then g1 and g2 are definitely not isomorphic, but if the result is true this is not guaranteed.

Examples

julia> using Graphs

julia> Graphs.Experimental.could_have_isomorph(path_graph(3), star_graph(4))
false

julia> Graphs.Experimental.could_have_isomorph(path_graph(3), star_graph(3))
true
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Graphs.Experimental.count_induced_subgraphisomorphFunction
count_induced_subgraphisomorph(g1, g2, alg::IsomorphismAlgorithm=VF2(); vertex_relation=nothing, edge_relation=nothing)

Return the number of vertex induced subgraphs of the graph g1 that are isomorphic to g2.

Optional Arguments

  • vertex_relation: A binary function that takes a vertex from g1 and one from g2. An isomorphism only exists if this function returns true for all matched vertices.
  • edge_relation: A binary function that takes an edge from g1 and one from g2. An isomorphism only exists if this function returns true for all matched edges.

Examples

julia> count_induced_subgraphisomorph(complete_graph(5), complete_graph(4))
120
julia> count_induced_subgraphisomorph(complete_graph(5), cycle_graph(4))
0

julia> g1 = path_graph(3); color1 = [1, 1, 2]
julia> g2 = path_graph(2); color2 = [1, 2]
julia> color_rel(u, v) = (color1[u] == color2[v])
julia> count_induced_subgraphisomorph(g1, g2)
2
julia> count_induced_subgraphisomorph(g1, g2, vertex_relation=color_rel)
1

See also

count_subgraphisomorph, count_isomorph, has_induced_subgraphisomorph, all_induced_subgraphisomorph

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Graphs.Experimental.count_isomorphFunction
count_isomorph(g1, g2, alg::IsomorphismAlgorithm=VF2(); vertex_relation=nothing, edge_relation=nothing)

Return the number of isomorphism from graph g1 to g2.

Optional Arguments

  • alg: The algorithm that is used to find the induced subgraph isomorphism. Can be only VF2() at the moment.
  • vertex_relation: A binary function that takes a vertex from g1 and one from g2. An isomorphism only exists if this function returns true for all matched vertices.
  • edge_relation: A binary function that takes an edge from g1 and one from g2. An isomorphism only exists if this function returns true for all matched edges.

Examples

julia> count_isomorph(cycle_graph(5), cycle_graph(5))
10
julia> count_isomorph(complete_graph(5), cycle_graph(5))
0

julia> g1 = cycle_digraph(3); color1 = [1, 1, 2]
julia> g2 = cycle_digraph(3); color2 = [1, 1, 1]
julia> color_rel(u, v) = (color1[u] == color2[v])
julia> count_isomorph(g1, g2)
3
julia> count_isomorph(g1, g2, vertex_relation=color_rel)
0

See also

count_induced_subgraphisomorph, count_subgraphisomorph, has_isomorph, all_isomorph

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Graphs.Experimental.count_subgraphisomorphFunction
count_subgraphisomorph(g1, g2, alg::IsomorphismAlgorithm=VF2(); vertex_relation=nothing, edge_relation=nothing)

Return the number of subgraphs of the graph g1 that are isomorphic to g2.

Optional Arguments

  • alg: The algorithm that is used to find the induced subgraph isomorphism. Can be only VF2() at the moment.
  • vertex_relation: A binary function that takes a vertex from g1 and one from g2. An isomorphism only exists if this function returns true for all matched vertices.
  • edge_relation: A binary function that takes an edge from g1 and one from g2. An isomorphism only exists if this function returns true for all matched edges.

Examples

julia> count_subgraphisomorph(complete_graph(5), complete_graph(4))
120
julia> count_subgraphisomorph(complete_graph(5), cycle_graph(4))
120

julia> g1 = cycle_digraph(3); color1 = [1, 1, 2]
julia> g2 = SimpleDiGraph(2); color2 = [1, 2]
julia> color_rel(u, v) = (color1[u] == color2[v])
julia> count_subgraphisomorph(g1, g2)
6
julia> count_subgraphisomorph(g1, g2, vertex_relation=color_rel)
2

See also

count_induced_subgraphisomorph, count_isomorph, has_subgraphisomorph, all_subgraphisomorph

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Graphs.Experimental.has_induced_subgraphisomorphFunction
has_induced_subgraphisomorph(g1, g2, alg::IsomorphismAlgorithm=VF2(); vertex_relation=nothing, edge_relation=nothing)

Return true if the graph g1 contains a vertex induced subgraph that is isomorphic to g2.

Optional Arguments

  • alg: The algorithm that is used to find the induced subgraph isomorphism. Can be only VF2() at the moment.
  • vertex_relation: A binary function that takes a vertex from g1 and one from g2. An isomorphism only exists if this function returns true for all matched vertices.
  • edge_relation: A binary function that takes an edge from g1 and one from g2. An isomorphism only exists if this function returns true for all matched edges.

Examples

julia> has_induced_subgraphisomorph(complete_graph(5), complete_graph(4))
true
julia> has_induced_subgraphisomorph(complete_graph(5), cycle_graph(4))
false

julia> g1 = path_digraph(3); color1 = [1, 1, 1]
julia> g2 = path_digraph(2); color2 = [1, 2]
julia> color_rel(u, v) = (color1[u] == color2[v])
julia> has_induced_subgraphisomorph(g1, g2)
true
julia> has_induced_subgraphisomorph(g1, g2, vertex_relation=color_rel)
false

See also

has_subgraphisomorph, has_isomorph, count_induced_subgraphisomorph, all_induced_subgraphisomorph

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Graphs.Experimental.has_isomorphFunction
has_isomorph(g1, g2, alg::IsomorphismAlgorithm=VF2(); vertex_relation=nothing, edge_relation=nothing)

Return true if the graph g1 is isomorphic to g2.

Optional Arguments

  • alg: The algorithm that is used to find the induced subgraph isomorphism. Can be only VF2() at the moment.
  • vertex_relation: A binary function that takes a vertex from g1 and one from g2. An isomorphism only exists if this function returns true for all matched vertices.
  • edge_relation: A binary function that takes an edge from g1 and one from g2. An isomorphism only exists if this function returns true for all matched edges.

Examples

julia> has_isomorph(complete_graph(3), cycle_graph(3))
true
julia> has_isomorph(complete_graph(4), cycle_graph(4))
false

julia> g1 = path_digraph(4); color1 = [1, 2, 1, 1]
julia> g2 = path_digraph(4); color2 = [1, 2, 2, 1]
julia> color_rel(u, v) = (color1[u] == color2[v])
julia> has_isomorph(g1, g2)
true
julia> has_isomorph(g1, g2, vertex_relation=color_rel)
false

See also

has_induced_subgraphisomorph, has_subgraphisomorph, count_subgraphisomorph, all_subgraphisomorph

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Graphs.Experimental.has_subgraphisomorphFunction
has_subgraphisomorph(g1, g2, alg::IsomorphismAlgorithm=VF2(); vertex_relation=nothing, edge_relation=nothing)

Return true if the graph g1 contains a subgraph that is isomorphic to g2.

Optional Arguments

  • alg: The algorithm that is used to find the induced subgraph isomorphism. Can be only VF2() at the moment.
  • vertex_relation: A binary function that takes a vertex from g1 and one from g2. An isomorphism only exists if this function returns true for all matched vertices.
  • edge_relation: A binary function that takes an edge from g1 and one from g2. An isomorphism only exists if this function returns true for all matched edges.

Examples

julia> has_subgraphisomorph(complete_graph(5), complete_graph(4))
true
julia> has_subgraphisomorph(complete_graph(5), cycle_graph(4))
true

julia> g1 = path_digraph(3); color1 = [1, 1, 1]
julia> g2 = path_digraph(2); color2 = [1, 2]
julia> color_rel(u, v) = (color1[u] == color2[v])
julia> has_subgraphisomorph(g1, g2)
true
julia> has_subgraphisomorph(g1, g2, vertex_relation=color_rel)
false

See also

has_induced_subgraphisomorph, has_isomorph, count_subgraphisomorph, all_subgraphisomorph

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Graphs.Experimental.vf2Method
vf2(callback, g1, g2, problemtype; vertex_relation=nothing, edge_relation=nothing)

Iterate over all isomorphism between the graphs g1 (or subgraphs thereof) and g2. The problem that is solved depends on the value of problemtype:

  • IsomorphismProblem(): Only isomorphisms between the whole graph g1 and g2 are considered.
  • SubGraphIsomorphismProblem(): All isomorphism between subgraphs of g1 and g2 are considered.
  • InducedSubGraphIsomorphismProblem(): All isomorphism between vertex induced subgraphs of g1 and g2 are considered.

Upon finding an isomorphism, the function callback is called with a vector vmap as an argument. vmap is a vector where vmap[v] == u means that vertex v in g2 is mapped to vertex u in g1. If the algorithm should look for another isomorphism, then this function should return true.

Optional Arguments

  • vertex_relation: A binary function that takes a vertex from g1 and one from g2. An isomorphism only exists if this function returns true for all matched vertices.
  • edge_relation: A binary function that takes an edge from g1 and one from g2. An isomorphism only exists if this function returns true for all matched edges.

References

Luigi P. Cordella, Pasquale Foggia, Carlo Sansone, Mario Vento “A (Sub)Graph Isomorphism Algorithm for Matching Large Graphs”

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Graphs.Experimental.Traversals.distancesMethod
distances(g, s, alg=BFS())
distances(g, ss, alg=BFS())

Return a vector filled with the geodesic distances of vertices in g from vertex s / unique vertices ss using BFS traversal algorithm alg. For vertices in disconnected components the default distance is typemax(T).

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Graphs.Experimental.Traversals.traverse_graph!Method
traverse_graph!(g, s, alg, state, neighborfn=outneighbors)
traverse_graph!(g, ss, alg, state, neighborfn=outneighbors)

Traverse a graph `g` starting at vertex `s` / vertices `ss` using algorithm `alg`, maintaining state in [`AbstractTraversalState`](@ref) `state`. Next vertices to be visited are determined by `neighborfn` (default `outneighbors`). Return `true` if traversal finished; `false` if one of the visit functions caused an early termination.
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Graphs.Experimental.Traversals.AbstractTraversalStateType
abstract type AbstractTraversalState

AbstractTraversalState is the abstract type used to hold mutable states for various traversal algorithms (see traverse_graph!).

When creating concrete types, you should override the following functions where relevant. These functions are listed in order of occurrence in the traversal:

Each of these functions should return a boolean. If the return value of the function is false, the traversal will return the state immediately. Otherwise, the traversal will continue.

For better performance, use the @inline directive and make your functions branch-free.

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Graphs.Experimental.Traversals.parentsMethod
parents(g, s, alg, neighborfn=outneighbors)

Return a vector of parent vertices indexed by vertex using TraversalAlgorithm alg starting with vertex s. If neighborfn is specified, use the corresponding neighbor-generation function (inneighborsr and outneighbors are valid values).

Performance

This implementation is designed to perform well on large graphs. There are implementations which are marginally faster in practice for smaller graphs, but the performance improvements using this implementation on large graphs can be significant.

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Graphs.Experimental.Traversals.traverse_graph!Method
traverse_graph!(g, s, alg, state, neighborfn=outneighbors)
traverse_graph!(g, ss, alg, state, neighborfn=outneighbors)

Traverse a graph g from source vertex s / vertices ss keeping track of state. Return true if traversal finished normally; false if one of the visit functions returned false (see )

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Graphs.Experimental.Traversals.treeFunction
tree(g, s, alg, neighborfn=outneighbors)

Return a directed acyclic graph based on traversal of the graph g starting with source vertex s using algorithm alg with neighbor function neighborfn.

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Graphs.Experimental.ShortestPaths.AStarType
struct AStar <: ShortestPathAlgorithm

The structure used to configure and specify that shortest_paths should use the A* search algorithm. An optional heuristic function may be supplied. If missing, the heuristic is set to n -> 0.

Implementation Notes

AStar supports the following shortest-path functionality:

  • non-negative distance matrices / weights
  • single destination
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Graphs.Experimental.ShortestPaths.BFSType
struct BFS <: ShortestPathAlgorithm

The structure used to configure and specify that shortest_paths should use the Breadth-First Search algorithm.

An optional sorting algorithm may be specified (default = no sorting). Sorting helps maintain cache locality and will improve performance on very large graphs; for normal use, sorting will incur a performance penalty.

BFS is the default algorithm used when a source is specified but no distance matrix is specified.

Implementation Notes

BFS supports the following shortest-path functionality:

  • (optional) multiple sources
  • all destinations
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Graphs.Experimental.ShortestPaths.DijkstraType
struct Dijkstra <: ShortestPathAlgorithm

The structure used to configure and specify that shortest_paths should use Dijkstra's algorithm to compute shortest paths. Optional fields for this structure include

  • all_paths::Bool - set to true to calculate all (redundant, equivalent) paths to a given destination
  • track_vertices::Bool - set to true to keep a running list of visited vertices (used for specific centrality calculations; generally not needed).

Dijkstra is the default algorithm used when a distance matrix is specified.

Implementation Notes

Dijkstra supports the following shortest-path functionality:

  • non-negative distance matrices / weights
  • (optional) multiple sources
  • all destinations
  • redundant equivalent path tracking
  • vertex tracking

Performance

If using a sparse matrix for distmx in shortest_paths, you may achieve better performance by passing in a transpose of its sparse transpose. That is, assuming D is the sparse distance matrix:

D = transpose(sparse(transpose(D)))

Be aware that realizing the sparse transpose of D incurs a heavy one-time penalty, so this strategy should only be used when multiple calls to shortest_paths with the distance matrix are planned.

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Graphs.Experimental.ShortestPaths.FloydWarshallType
struct FloydWarshall <: ShortestPathAlgorithm

The structure used to configure and specify that shortest_paths should use the Floyd-Warshall algorithm. No additional configuration parameters are specified or required.

FloydWarshall is the default all-pairs algorithm used when no source is specified.

Implementation Notes

FloydWarshall supports the following shortest-path functionality:

  • non-negative distance matrices / weights
  • all-pairs shortest paths

Performance

Space complexity is on the order of $\mathcal{O}(|V|^2)$.

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Graphs.Experimental.ShortestPaths.JohnsonType
struct Johnson <: ShortestPathAlgorithm

The structure used to configure and specify that shortest_paths should use the Johnson algorithm. No additional configuration parameters are specified or required.

Implementation Notes

Johnson supports the following shortest-path functionality:

  • non-negative distance matrices / weights
  • all-pairs shortest paths

Performance

Complexity: O(|V|*|E|)

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Graphs.Experimental.ShortestPaths.has_negative_weight_cycleFunction
has_negative_weight_cycle(g[, distmx=weights(g), alg=BellmanFord()])

Given a graph g, an optional distance matrix distmx, and an optional algorithm alg (one of BellmanFord or SPFA), return true if any cycle detected in the graph has a negative weight.

Examples

julia> using Graphs, Graphs.Experimental.ShortestPaths

julia> g = complete_graph(3);

julia> d = [1 -3 1; -3 1 1; 1 1 1];

julia> has_negative_weight_cycle(g, d)
true

julia> g = complete_graph(4);

julia> d = [1 1 -1 1; 1 1 -1 1; 1 1 1 1; 1 1 1 1];

julia> has_negative_weight_cycle(g, d, SPFA())
false
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Graphs.Experimental.ShortestPaths.pathsMethod
paths(state[, v])
paths(state[, vs])
paths(state[, v, d]))

Given the output of a shortest_paths calculation of type ShortestPathResult, return a vector (indexed by vertex) of the paths between the source vertex used to compute the shortest path and a single destination vertex v, a vector of destination vertices vs, or the entire graph.

For multiple destination vertices, each path is represented by a vector of vertices on the path between the source and the destination. Nonexistent paths will be indicated by an empty vector. For single destinations, the path is represented by a single vector of vertices, and will be length 0 if the path does not exist.

For ShortestPathAlgorithms that compute all shortest paths for all pairs of vertices, paths(state) will return a vector (indexed by source vertex) of vectors (indexed by destination vertex) of paths. paths(state, v) will return a vector (indexed by destination vertex) of paths from source v to all other vertices. In addition, paths(state, v, d) will return a vector representing the path from vertex v to vertex d.

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Graphs.Experimental.ShortestPaths.shortest_pathsMethod
shortest_paths(g, s, distmx, alg)
shortest_paths(g, s, t, alg)
shortest_paths(g, s, alg)
shortest_paths(g, s)
shortest_paths(g)

Return a ShortestPathResult that allows construction of the shortest path between sets of vertices in graph g. Depending on the algorithm specified, other information may be required: (e.g., a distance matrix distmx, and/or a target vertex t). Some algorithms will accept multiple source vertices s; algorithms that do not accept any source vertex s produce all-pairs shortest paths.

See ShortestPathAlgorithm for more details on the algorithm specifications.

Implementation Notes

The elements of distmx may be of any type that has a Total Ordering and valid comparator, zero and typemax functions. Concretely, this means that distance matrices containing complex numbers are invalid.

Examples

g = path_graph(4)
w = zeros(4, 4)
for i in 1:3
    w[i, i+1] = 1.0
    w[i+1, i] = 1.0
end

s1 = shortest_paths(g)                   # `alg` defaults to `FloydWarshall`
s2 = shortest_paths(g, 1)                # `alg` defaults to `BFS`
s3 = shortest_paths(g, 1, w)             # `alg` defaults to `Dijkstra`
s4 = shortest_paths(g, 1, BellmanFord())
s5 = shortest_paths(g, 1, w, DEsopoPape())
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Graphs.Experimental.ShortestPaths.has_negative_weight_cycleMethod

Function which returns true if there is any negative weight cycle in the graph.

Examples

julia> using Graphs

julia> g = complete_graph(3);

julia> d = [1 -3 1; -3 1 1; 1 1 1];

julia> has_negative_weight_cycle(g, d, SPFA())
true

julia> g = complete_graph(4);

julia> d = [1 1 -1 1; 1 1 -1 1; 1 1 1 1; 1 1 1 1];

julia> has_negative_weight_cycle(g, d, SPFA());
false
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Graphs.Experimental.Parallel.gdistances!Method
gdistances!(g, sources, vert_level; queue_segment_size=20)
gdistances!(g, source, vert_level; queue_segment_size=20)

Parallel implementation of Graphs.gdistances! with dynamic load balancing.

Optional Arguments

  • queue_segment_size = 20: It is the number of vertices a thread can claim from a queue

at a time. For graphs with uniform degree, a larger value of queue_segment_size could improve performance.

References

  • [Avoiding Locks and Atomic Instructions in Shared-Memory Parallel BFS Using Optimistic

Parallelization](https://www.computer.org/csdl/proceedings/ipdpsw/2013/4979/00/4979b628-abs.html).

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Graphs.Experimental.Parallel.gdistancesMethod
gdistances(g, sources; queue_segment_size=20)
gdistances(g, source; queue_segment_size=20)

Parallel implementation of Graphs.gdistances! with dynamic load balancing.

Optional Arguments

  • queue_segment_size = 20: It is the number of vertices a thread can claim from a queue at a time.

For denser graphs, a smaller value of queue_segment_size could improve performance.

References

  • [Avoiding Locks and Atomic Instructions in Shared-Memory Parallel BFS Using Optimistic

Parallelization](https://www.computer.org/csdl/proceedings/ipdpsw/2013/4979/00/4979b628-abs.html).

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